#include #include #include #include #include #include #include "utils.h" void pm(int M, int N, float *A) { int i,j; for(i =0 ; i < M; ++i){ for(j = 0; j < N; ++j){ printf("%10.6f, ", A[i*N+j]); } printf("\n"); } printf("\n"); } char *find_replace(char *str, char *orig, char *rep) { static char buffer[4096]; char *p; if(!(p = strstr(str, orig))) // Is 'orig' even in 'str'? return str; strncpy(buffer, str, p-str); // Copy characters from 'str' start to 'orig' st$ buffer[p-str] = '\0'; sprintf(buffer+(p-str), "%s%s", rep, p+strlen(orig)); return buffer; } float sec(clock_t clocks) { return (float)clocks/CLOCKS_PER_SEC; } void top_k(float *a, int n, int k, int *index) { int i,j; for(j = 0; j < k; ++j) index[j] = 0; for(i = 0; i < n; ++i){ int curr = i; for(j = 0; j < k; ++j){ if(a[curr] > a[index[j]]){ int swap = curr; curr = index[j]; index[j] = swap; } } } } void error(const char *s) { perror(s); exit(0); } void malloc_error() { fprintf(stderr, "Malloc error\n"); exit(-1); } void file_error(char *s) { fprintf(stderr, "Couldn't open file: %s\n", s); exit(0); } list *split_str(char *s, char delim) { size_t i; size_t len = strlen(s); list *l = make_list(); list_insert(l, s); for(i = 0; i < len; ++i){ if(s[i] == delim){ s[i] = '\0'; list_insert(l, &(s[i+1])); } } return l; } void strip(char *s) { size_t i; size_t len = strlen(s); size_t offset = 0; for(i = 0; i < len; ++i){ char c = s[i]; if(c==' '||c=='\t'||c=='\n') ++offset; else s[i-offset] = c; } s[len-offset] = '\0'; } void strip_char(char *s, char bad) { size_t i; size_t len = strlen(s); size_t offset = 0; for(i = 0; i < len; ++i){ char c = s[i]; if(c==bad) ++offset; else s[i-offset] = c; } s[len-offset] = '\0'; } char *fgetl(FILE *fp) { if(feof(fp)) return 0; size_t size = 512; char *line = malloc(size*sizeof(char)); if(!fgets(line, size, fp)){ free(line); return 0; } size_t curr = strlen(line); while((line[curr-1] != '\n') && !feof(fp)){ if(curr == size-1){ size *= 2; line = realloc(line, size*sizeof(char)); if(!line) { printf("%ld\n", size); malloc_error(); } } size_t readsize = size-curr; if(readsize > INT_MAX) readsize = INT_MAX-1; fgets(&line[curr], readsize, fp); curr = strlen(line); } if(line[curr-1] == '\n') line[curr-1] = '\0'; return line; } char *copy_string(char *s) { char *copy = malloc(strlen(s)+1); strncpy(copy, s, strlen(s)+1); return copy; } list *parse_csv_line(char *line) { list *l = make_list(); char *c, *p; int in = 0; for(c = line, p = line; *c != '\0'; ++c){ if(*c == '"') in = !in; else if(*c == ',' && !in){ *c = '\0'; list_insert(l, copy_string(p)); p = c+1; } } list_insert(l, copy_string(p)); return l; } int count_fields(char *line) { int count = 0; int done = 0; char *c; for(c = line; !done; ++c){ done = (*c == '\0'); if(*c == ',' || done) ++count; } return count; } float *parse_fields(char *line, int n) { float *field = calloc(n, sizeof(float)); char *c, *p, *end; int count = 0; int done = 0; for(c = line, p = line; !done; ++c){ done = (*c == '\0'); if(*c == ',' || done){ *c = '\0'; field[count] = strtod(p, &end); if(p == c) field[count] = nan(""); if(end != c && (end != c-1 || *end != '\r')) field[count] = nan(""); //DOS file formats! p = c+1; ++count; } } return field; } float sum_array(float *a, int n) { int i; float sum = 0; for(i = 0; i < n; ++i) sum += a[i]; return sum; } float mean_array(float *a, int n) { return sum_array(a,n)/n; } float variance_array(float *a, int n) { int i; float sum = 0; float mean = mean_array(a, n); for(i = 0; i < n; ++i) sum += (a[i] - mean)*(a[i]-mean); float variance = sum/n; return variance; } float constrain(float a, float max) { if(a > abs(max)) return abs(max); if(a < -abs(max)) return -abs(max); return a; } void normalize_array(float *a, int n) { int i; float mu = mean_array(a,n); float sigma = sqrt(variance_array(a,n)); for(i = 0; i < n; ++i){ a[i] = (a[i] - mu)/sigma; } mu = mean_array(a,n); sigma = sqrt(variance_array(a,n)); } void translate_array(float *a, int n, float s) { int i; for(i = 0; i < n; ++i){ a[i] += s; } } void scale_array(float *a, int n, float s) { int i; for(i = 0; i < n; ++i){ a[i] *= s; } } int max_index(float *a, int n) { if(n <= 0) return -1; int i, max_i = 0; float max = a[0]; for(i = 1; i < n; ++i){ if(a[i] > max){ max = a[i]; max_i = i; } } return max_i; } // From http://en.wikipedia.org/wiki/Box%E2%80%93Muller_transform #define TWO_PI 6.2831853071795864769252866 float rand_normal() { static int haveSpare = 0; static double rand1, rand2; if(haveSpare) { haveSpare = 0; return sqrt(rand1) * sin(rand2); } haveSpare = 1; rand1 = rand() / ((double) RAND_MAX); if(rand1 < 1e-100) rand1 = 1e-100; rand1 = -2 * log(rand1); rand2 = (rand() / ((double) RAND_MAX)) * TWO_PI; return sqrt(rand1) * cos(rand2); } /* float rand_normal() { int n = 12; int i; float sum= 0; for(i = 0; i < n; ++i) sum += (float)rand()/RAND_MAX; return sum-n/2.; } */ float rand_uniform() { return (float)rand()/RAND_MAX; } float **one_hot_encode(float *a, int n, int k) { int i; float **t = calloc(n, sizeof(float*)); for(i = 0; i < n; ++i){ t[i] = calloc(k, sizeof(float)); int index = (int)a[i]; t[i][index] = 1; } return t; }